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EDP07635 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP07635" - Squamosa promoter binding protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP07635Squamosa promoter binding protein (1020 aa)    
Predicted Functional Partners:
EDP05524
Predicted protein (1137 aa)
     
        0.505
EDP02530
Predicted protein (2308 aa)
     
        0.501
CAV6
Voltage-gated Ca2+ channel, alpha subunit (1734 aa)
     
        0.494
EDO96847
Predicted protein (396 aa)
     
        0.493
STPK15
Serine/threonine protein kinase 15 (329 aa)
     
        0.477
EDP06431
Predicted protein (1012 aa)
     
        0.475
EDP06451
Predicted protein (1020 aa)
     
        0.463
EDP09321
Predicted protein (2402 aa)
     
        0.425
FAP228
Flagellar associated protein, callose synthase-like protein (3562 aa)
     
        0.425
FAP261
Flagellar associated protein (3547 aa)
     
        0.424
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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