STRINGSTRING
EDP07644 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP07644" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP07644Predicted protein (313 aa)    
Predicted Functional Partners:
EDP01844
Predicted protein (890 aa)
     
 
  0.807
VPS52
Subunit of GARP complex (657 aa)
     
 
  0.721
EDP05767
Predicted protein (912 aa)
     
      0.682
VPS53
Subunit of GARP complex (1033 aa)
     
 
  0.656
EDP06084
WD40 repeat protein (382 aa)
     
 
  0.639
CUL2
Cullin (782 aa)
     
 
  0.503
DDB1
UV-damaged DNA binding complex subunit 1 protein (1147 aa)
     
 
  0.478
EDP07588
Predicted protein (287 aa)
     
        0.435
EDP09592
Predicted protein (698 aa)
     
        0.418
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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