STRINGSTRING
EDP07674 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP07674" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP07674Predicted protein (408 aa)    
Predicted Functional Partners:
USE1
Qc-SNARE protein, USE1 family (482 aa)
     
        0.650
EDO98845
Predicted protein (471 aa)
     
        0.509
EDP01523
Predicted protein (366 aa)
     
        0.503
EDP07790
Predicted protein (452 aa)
     
        0.501
EDP06461
Predicted protein (414 aa)
     
        0.497
LRG5
Predicted protein (681 aa)
     
        0.477
EDP09509
Predicted protein (494 aa)
     
        0.475
DNJ19
DnaJ-like protein (482 aa)
     
        0.475
TRF4
Trf4 poly(A) polymerase (1144 aa)
     
        0.475
EDO96472
Predicted protein (546 aa)
     
        0.475
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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