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HTV1 protein (Chlamydomonas reinhardtii) - STRING interaction network
"HTV1" - Histone H3 variant in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HTV1Histone H3 variant (105 aa)    
Predicted Functional Partners:
HAV2
Histone H2A variant (127 aa)
     
  0.943
ASF1
Anti-silencing factor (225 aa)
     
 
  0.933
EDP08720
Histone H2A (129 aa)
     
  0.932
HTA10
Histone H2A (132 aa)
     
  0.932
HTA4
Histone H2A (130 aa)
     
  0.932
EDP08438
Histone H2A (130 aa)
     
  0.932
EDP08430
Histone H2A (130 aa)
     
  0.932
EDP08421
Histone H2A (130 aa)
     
  0.932
HTA8
Histone H2A (132 aa)
     
  0.932
EDP08255
Histone H2A (132 aa)
     
  0.932
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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