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HLA3 protein (Chlamydomonas reinhardtii) - STRING interaction network
"HLA3" - ABC transporter in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HLA3ABC transporter (1082 aa)    
Predicted Functional Partners:
NAR1.2
Anion transporter (336 aa)
           
  0.780
LCI1
low-CO2-inducible membrane protein (192 aa)
           
  0.779
CAH3
Carbonic anhydrase 3 (310 aa)
           
  0.735
LCIB
low-CO2-inducible protein (448 aa)
           
  0.722
CAH6
Carbonic anhydrase 6; Reversible hydration of carbon dioxide (264 aa)
           
  0.719
CCP1
low-CO2-inducible chloroplast envelope protein (358 aa)
           
  0.712
CCP2
low-CO2-inducible chloroplast envelope protein (355 aa)
           
  0.706
CCM1
Regulator of CO2-responsive genes (699 aa)
           
  0.705
RCA1
Rubisco activase (408 aa)
       
  0.625
FTT2
14-3-3 protein (247 aa)
       
      0.625
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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