STRINGSTRING
MSD1 protein (Chlamydomonas reinhardtii) - STRING interaction network
"MSD1" - Superoxide dismutase [Mn] in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MSD1Superoxide dismutase [Mn]; Destroys radicals which are normally produced within the cells and which are toxic to biological systems (218 aa)    
Predicted Functional Partners:
CAT1
Catalase/peroxidase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide (493 aa)
       
  0.930
APX1
Ascorbate peroxidase (327 aa)
     
  0.874
GPX5
Glutathione peroxidase (162 aa)
     
  0.849
GPX3
Glutathione peroxidase (200 aa)
     
  0.812
GPX4
Glutathione peroxidase (206 aa)
     
  0.812
GSHR1
Glutathione reductase (493 aa)
   
   
  0.795
PRX7
Peroxiredoxin (185 aa)
   
   
  0.776
PRX1
2-cys peroxiredoxin, chloroplastic (235 aa)
   
   
  0.774
PCY1
Plastocyanin, chloroplast precursor; Participates in electron transfer between P700 and the cytochrome b6-f complex in photosystem I (145 aa)
           
  0.731
GSHR2
Glutathione reductase (426 aa)
   
   
  0.729
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
Server load: low (6%) [HD]