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SEC23B protein (Chlamydomonas reinhardtii) - STRING interaction network
"SEC23B" - COP-II coat subunit in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEC23BCOP-II coat subunit (682 aa)    
Predicted Functional Partners:
COG4
Component of oligomeric golgi complex 4 (1094 aa)
     
        0.509
COG5
Component of oligomeric golgi complex 5 (764 aa)
     
        0.508
EDP06823
Predicted protein (467 aa)
     
        0.480
EDP05603
Predicted protein (806 aa)
     
        0.475
EDO96508
Predicted protein (1454 aa)
     
        0.475
SEC24B
COP-II coat subunit (1080 aa)
     
        0.469
EDP04681
Predicted protein (400 aa)
     
        0.425
COPB2
Beta’-cop (982 aa)
     
        0.416
EDP09020
Protein kinase (816 aa)
     
        0.404
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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