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STRINGSTRING
LCIB protein (Chlamydomonas reinhardtii) - STRING interaction network
"LCIB" - LciB in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCIBLciB; Low-CO2-inducible protein (448 aa)    
Predicted Functional Partners:
NAR1.2
Anion transporter; Low-CO2 inducible protein LCIA; NAR1.2 (336 aa)
           
  0.868
CAH3
Carbonic anhydrase 3 (310 aa)
     
   
  0.842
HLA3
ABC transporter (1082 aa)
           
  0.842
CAH1
Carbonic anhydrase 1; Reversible hydration of carbon dioxide; Belongs to the alpha-carbonic anhydrase family (377 aa)
           
  0.825
CAH6
Carbonic anhydrase; Reversible hydration of carbon dioxide (264 aa)
           
  0.805
CAH2
Carbonic anhydrase 2; Reversible hydration of carbon dioxide; Belongs to the alpha-carbonic anhydrase family (380 aa)
           
  0.754
LCI1
Low-CO2-inducible membrane protein (192 aa)
           
  0.752
CCM1
CCM1-A; Regulator of CO2-responsive genes (699 aa)
           
  0.727
CCP1
Low-CO2-inducible chloroplast envelope protein ; Belongs to the mitochondrial carrier (TC 2.A.29) family (358 aa)
           
  0.676
COX4
Mitochondrial cytochrome c oxidase subunit 4, 13 kD (175 aa)
           
  0.609
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, SAG 53.72 [[Chlamydomonas smithii]], SAG 54.72 [[Chlamydomonas smithii]], UTEX 90
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