STRINGSTRING
EDP07843 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP07843" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP07843Predicted protein (1161 aa)    
Predicted Functional Partners:
EDP07842
Predicted protein (2593 aa)
     
     
0.651
EDP04195
Predicted protein (365 aa)
     
        0.504
ELG29
Exostosin-like glycosyltransferase (947 aa)
     
        0.480
LANC1
LanC lantibiotic synthetase component C-like protein (376 aa)
     
        0.477
ZIP4
ZIP family transporter (264 aa)
     
        0.475
EDO96710
Predicted protein (760 aa)
     
        0.475
EDP02145
Set/thr protein phosphatase (554 aa)
     
        0.450
EDP00261
Predicted protein (281 aa)
     
        0.414
EDO99979
Predicted protein (978 aa)
     
        0.409
CSG7
Predicted protein of CSG family (372 aa)
     
        0.406
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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