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EDP07915 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP07915" - NADH-dependent histone deacetylase in Chlamydomonas reinhardtii
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP07915NADH-dependent histone deacetylase (269 aa)    
Predicted Functional Partners:
RPL35
Ribosomal protein L35 (130 aa)
       
      0.822
NIC7
Quinolinate synthetase A-like protein (222 aa)
         
  0.800
EDO96250
Histone deacetylase (273 aa)
   
  0.755
UNI3
Delta tubulin (447 aa)
     
  0.744
EDP02188
Histone deacetylase (419 aa)
   
  0.728
EDO98539
Histone deacetylase (339 aa)
   
  0.719
RPL17
Ribosomal protein L17 (186 aa)
 
            0.719
EDP03175
Histone methyltransferase (1708 aa)
     
  0.710
PYR5
Uridine 5’-monophosphate synthase (474 aa)
         
  0.700
EDP00245
Histone deacetylase (79 aa)
   
  0.696
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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