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EDP07916 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP07916" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP07916Predicted protein (411 aa)    
Predicted Functional Partners:
VPS35
Subunit of retromer complex (739 aa)
     
  0.933
VPS26
Subunit of retromer complex (320 aa)
     
  0.924
VPS29
Subunit of retromer complex (188 aa)
     
  0.907
VPS34
VPS34-like PI-3-kinase (1098 aa)
     
  0.697
EDP05338
Protein of receptor mediated endocytosis family (1482 aa)
     
 
  0.685
PIN4
Peptidyl-prolyl cis-trans isomerase, parvulin-type (255 aa)
       
      0.664
CGL44
RabGAP/TBC protein (318 aa)
     
 
    0.578
APG6
Autophagy protein (495 aa)
     
 
  0.552
VPS11
Subunit of VPS-C complex (1102 aa)
     
   
  0.534
EDP01031
Predicted protein (292 aa)
     
 
    0.533
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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