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EDP07922 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP07922" - Predicted protein in Chlamydomonas reinhardtii
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP07922Predicted protein (738 aa)    
Predicted Functional Partners:
SEC24A
COP-II coat subunit (820 aa)
     
        0.644
COPB2
Beta’-cop (982 aa)
     
        0.524
SEC31
COP-II coat subunit (1313 aa)
     
        0.515
EDP09806
Predicted protein (925 aa)
     
        0.502
SEC63
ER-targeted preprotein translocase subunit (1075 aa)
     
        0.501
TRN1
Transportin (898 aa)
     
        0.499
AMD1
Alpha-1,2-mannosidase (670 aa)
     
        0.496
SEC13
COP-II coat subunit (299 aa)
     
        0.491
EDO99051
SWI/SNF2 superfamily protein (531 aa)
     
        0.479
COPG1
Gamma-cop; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins (883 aa)
     
        0.477
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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