STRINGSTRING
EDP07966 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP07966" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP07966Predicted protein (3811 aa)    
Predicted Functional Partners:
EDP05946
Predicted protein (171 aa)
     
   
  0.740
EDP06043
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1167 aa)
     
   
  0.600
EDP01479
Predicted protein (1973 aa)
     
        0.567
MOT26
Predicted protein (135 aa)
     
   
  0.562
EDO98545
Predicted protein (216 aa)
     
   
  0.562
CAV8
Voltage-gated Ca2+ channel, alpha subunit (4695 aa)
     
        0.540
EDO96559
Predicted protein (5850 aa)
     
   
  0.534
EDP03833
Predicted protein (612 aa)
     
        0.534
EDP05847
Predicted protein (2386 aa)
     
        0.532
EDP03227
Predicted protein (5080 aa)
     
        0.531
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, SAG 53.72 [[Chlamydomonas smithii]], SAG 54.72 [[Chlamydomonas smithii]], UTEX 90
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