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EDP07978 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP07978" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP07978Predicted protein (1041 aa)    
Predicted Functional Partners:
EDP09187
Predicted protein (1367 aa)
     
        0.532
EDP04104
Predicted protein (271 aa)
     
        0.530
EDP03927
Predicted protein (456 aa)
     
        0.530
EDP02557
Predicted protein (856 aa)
     
        0.530
CGLD30
Histone methyltransferase (1028 aa)
     
        0.530
EDP07915
NADH-dependent histone deacetylase (269 aa)
     
        0.528
DDB1
UV-damaged DNA binding complex subunit 1 protein (1147 aa)
     
        0.527
EDP09957
Predicted protein (1517 aa)
     
        0.487
ARP2
Actin-related protein ; Belongs to the actin family (394 aa)
     
        0.457
EDP04394
Predicted protein (358 aa)
     
        0.412
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, SAG 53.72 [[Chlamydomonas smithii]], SAG 54.72 [[Chlamydomonas smithii]], UTEX 90
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