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EDP07981 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP07981" - SWI/SNF chromatin remodeling complex protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP07981SWI/SNF chromatin remodeling complex protein (642 aa)    
Predicted Functional Partners:
ARP4
Actin-related protein (458 aa)
     
  0.979
EDP05744
Predicted protein (1002 aa)
     
  0.953
EDP06235
SWI2/SNF2-like protein (1286 aa)
     
  0.950
EDP08982
HMGB protein (513 aa)
     
 
  0.939
EDP00677
Predicted protein (532 aa)
     
    0.924
TOP2
DNA topoisomerase II; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1167 aa)
     
  0.920
CKS1
Cyclin dependent kinase regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function (88 aa)
       
      0.920
FAP89
Flagellar associated protein (1265 aa)
     
    0.899
EDO99891
SNF2 superfamily protein (876 aa)
     
  0.834
EDP05936
chromodomain-helicase-DNA-binding protein (1219 aa)
     
  0.834
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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