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EDP07994 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP07994" - Type I polyketide synthase in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP07994Type I polyketide synthase (21004 aa)    
Predicted Functional Partners:
EDP09227
Hypothetical protein (510 aa)
       
  0.724
EDP07127
Predicted protein (256 aa)
       
  0.724
DUR1
Urea carboxylase (1251 aa)
   
 
  0.688
EDO97598
Predicted protein (297 aa)
   
 
  0.668
EDP09078
Predicted protein (440 aa)
   
 
  0.624
EDO97049
Biotin carboxylase, acetyl-CoA carboxylase component (483 aa)
   
 
  0.624
EDP02542
Predicted protein (422 aa)
       
  0.611
BCC1
Acetyl-coa biotin carboxyl carrier (228 aa)
   
 
  0.602
ATF1
Glucosamine--fructose-6-phosphate aminotransferase (679 aa)
       
 
  0.588
TOP2
DNA topoisomerase II; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1167 aa)
     
 
  0.579
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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