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STRINGSTRING
EDP08003 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP08003" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP08003Predicted protein (647 aa)    
Predicted Functional Partners:
EDP00191
Predicted protein (662 aa)
     
 
  0.995
EDP07462
Predicted protein (940 aa)
     
      0.993
EDP04107
Predicted protein (309 aa)
     
 
  0.991
EDP06674
Predicted protein (216 aa)
     
 
  0.988
EDP07550
Predicted protein (281 aa)
     
 
  0.987
EDP07846
Predicted protein (286 aa)
     
 
  0.985
EDP03165
Predicted protein (330 aa)
     
 
  0.975
EDO98904
Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (678 aa)
     
 
  0.972
EDP06418
Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (634 aa)
     
 
  0.965
EDP02150
MAK16-like protein RBM13 ; Belongs to the MAK16 family (363 aa)
     
      0.964
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, SAG 53.72 [[Chlamydomonas smithii]], SAG 54.72 [[Chlamydomonas smithii]], UTEX 90
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