STRINGSTRING
EDP08009 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP08009" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP08009Predicted protein (223 aa)    
Predicted Functional Partners:
PF15
Katanin p80 subunit; May participate in a complex which severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays (798 aa)
     
 
  0.897
EDO97677
Predicted protein (173 aa)
   
          0.523
EDP08585
Predicted protein (62 aa)
   
   
  0.522
FTSH11
Membrane AAA-metalloprotease (205 aa)
 
          0.506
EDP02763
Predicted protein (80 aa)
       
 
  0.455
DYRK1
Dual-specificity tyrosine regulated protein kinase 1 (357 aa)
       
 
  0.455
DYRK2
Dual-specificity tyrosine regulated protein kinase 2 (287 aa)
       
 
  0.455
EDO98269
Predicted protein (267 aa)
       
 
  0.455
EDO99686
Kinesin-like calmodulin binding protein (1158 aa)
     
 
  0.435
EDP07147
Predicted protein (94 aa)
     
 
  0.412
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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