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EDP08013 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP08013" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP08013Predicted protein (266 aa)    
Predicted Functional Partners:
EXO70
Component of the exocyst complex (803 aa)
     
        0.577
EDP01478
Predicted protein (374 aa)
     
        0.507
EIF2B
Eukaryotic initiation factor (434 aa)
     
        0.502
EDP04764
Predicted protein (528 aa)
     
        0.475
EDP03484
Predicted protein (392 aa)
     
        0.475
RBL8
Rhomboid-like protein (406 aa)
     
        0.475
RNB1
3’-5’ exoribonuclease (1061 aa)
     
        0.426
EDP08724
Predicted protein (504 aa)
     
        0.413
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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