STRINGSTRING
MSCL1 protein (Chlamydomonas reinhardtii) - STRING interaction network
"MSCL1" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MSCL1Predicted protein (592 aa)    
Predicted Functional Partners:
EDP02420
Predicted protein (323 aa)
     
        0.520
EDP00988
AIR synthase-related protein (1403 aa)
   
        0.518
EDP02419
Predicted protein (143 aa)
     
        0.516
EDO98368
Predicted protein (2252 aa)
     
        0.504
EDP09821
Predicted protein (102 aa)
     
        0.502
EDP07959
Predicted protein (421 aa)
   
        0.478
EDP00577
Predicted protein (743 aa)
     
        0.475
CAV9
Voltage-gated Ca2+ channel, alpha subunit (1878 aa)
     
        0.475
GUA1
GMP synthetase (535 aa)
         
  0.453
EDO98866
Predicted protein (476 aa)
   
   
  0.431
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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