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EDP08038 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP08038" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP08038Predicted protein (256 aa)    
Predicted Functional Partners:
EDP02584
Predicted protein (259 aa)
     
        0.480
EDP09654
Predicted protein (445 aa)
     
        0.475
EDP08752
Predicted protein (366 aa)
     
        0.475
VPS18
Subunit of the VPS-C complex (1029 aa)
     
        0.475
EDP03928
Predicted protein (394 aa)
     
        0.475
EDO99979
Predicted protein (978 aa)
     
        0.475
COPT1
CTR type copper ion transporter (241 aa)
     
        0.427
EDO97987
Predicted protein (738 aa)
     
        0.425
EDP07947
Predicted protein (356 aa)
     
        0.418
UPF2
UPF2 protein (301 aa)
     
        0.415
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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