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MBD1 protein (Chlamydomonas reinhardtii) - STRING interaction network
"MBD1" - NAC2 protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MBD1NAC2 protein (1385 aa)    
Predicted Functional Partners:
CPL1
Predicted protein (311 aa)
           
  0.720
TBA1
psbA translation factor (431 aa)
           
  0.711
TAB2
PsaB RNA binding protein (358 aa)
     
   
  0.632
TBC2
Translation factor for chloroplast psbC mRNA (1115 aa)
     
   
  0.524
SPCS
Selenocysteine synthase; Converts O-phosphoseryl-tRNA(Sec) to selenocysteinyl- tRNA(Sec) required for selenoprotein biosynthesis (483 aa)
           
  0.468
FAP146
Flagellar associated protein (380 aa)
           
  0.465
EDP02470
Predicted protein (234 aa)
     
        0.411
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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