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EDP08049 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP08049" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP08049Predicted protein (470 aa)    
Predicted Functional Partners:
DDC1
Aromatic-aminoacid decarboxylase (474 aa)
     
 
    0.903
EDP05401
Aldehyde dehydrogenase (536 aa)
         
    0.900
EDP04638
Predicted protein (294 aa)
         
    0.900
FDH1
Formaldehyde dehydrogenase (377 aa)
         
    0.900
AST4
Aspartate aminotransferase (399 aa)
         
    0.800
AST3
Aspartate aminotransferase (428 aa)
         
    0.800
AST1
Aspartate aminotransferase (433 aa)
         
    0.800
EDP02047
Predicted protein (434 aa)
         
    0.800
HIS5
Histidinol phosphate aminotransferase (373 aa)
         
    0.800
AMX1
Copper amine oxidase (615 aa)
         
    0.800
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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