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EDP08080 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP08080" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP08080Predicted protein (581 aa)    
Predicted Functional Partners:
MKS1
Ortholog of meckel syndrome 1 (200 aa)
     
0.902
POC12
Centriole proteome protein (1828 aa)
     
  0.772
NPH4
Nephrocystin-4-like protein (1772 aa)
     
 
  0.758
EDP09100
Predicted protein (654 aa)
     
 
  0.735
UNI3
Delta tubulin (447 aa)
     
 
  0.599
TUG
Gamma tubulin; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome (468 aa)
     
 
  0.573
EDP01883
Predicted protein (351 aa)
     
 
  0.563
EDP08157
Predicted protein (1391 aa)
     
 
    0.561
EDO99797
Predicted protein (145 aa)
     
 
    0.552
EDP00130
CLIP-associating-protein (1581 aa)
     
 
    0.546
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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