STRINGSTRING
EDP08129 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP08129" - PAN3-like protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP08129PAN3-like protein (285 aa)    
Predicted Functional Partners:
EDP05128
PAN2-like protein (979 aa)
     
  0.996
EDP00325
Predicted protein (163 aa)
     
  0.949
RB47
Polyadenylate-binding protein RB47; Binds the poly(A) tail of mRNA (636 aa)
       
  0.741
EDO97987
Predicted protein (738 aa)
     
        0.654
EDO97236
Predicted protein (954 aa)
     
        0.650
EDO96956
Predicted protein (632 aa)
     
 
  0.626
EDP00856
Predicted protein (456 aa)
     
        0.614
EDP07981
SWI/SNF chromatin remodeling complex protein (642 aa)
     
      0.589
SSA7
Predicted protein (765 aa)
     
   
  0.589
EDP03946
Predicted protein (96 aa)
     
 
    0.568
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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