STRINGSTRING
RPS27a protein (Chlamydomonas reinhardtii) - STRING interaction network
"RPS27a" - Ribosomal protein S27a in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPS27aRibosomal protein S27a (182 aa)    
Predicted Functional Partners:
RPS24
Ribosomal protein S24 (131 aa)
   
  0.894
RPS19
Ribosomal protein S19 (150 aa)
     
  0.878
RPS6
Ribosomal protein S6 (248 aa)
   
  0.867
RPS17
Ribosomal protein S17 (139 aa)
   
  0.856
RPS3a
Ribosomal protein S3a (259 aa)
   
  0.848
RPS4
Ribosomal protein S4 (261 aa)
     
  0.834
EIF2G
Eukaryotic initiation factor (462 aa)
     
    0.827
RPS15a
Ribosomal protein S15a (130 aa)
     
  0.816
rps8
Ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit (153 aa)
     
  0.816
RPS27-B
Ribosomal protein S27 isoform B (86 aa)
     
  0.815
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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