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EDP08175 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP08175" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP08175Predicted protein (688 aa)    
Predicted Functional Partners:
EDP06649
Predicted protein (353 aa)
   
 
  0.951
MRPL19
Mitochondrial ribosomal protein L19 (312 aa)
   
  0.943
MRPL20
Mitochondrial ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit (115 aa)
   
  0.931
rpl20
Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit (By similarity) (112 aa)
   
  0.931
EDP06926
Predicted protein (796 aa)
   
   
  0.925
EDP03132
Mitochondrial ribosomal protein L17 (259 aa)
     
    0.919
MRPL4
Mitochondrial ribosomal protein L4 (124 aa)
     
  0.918
PRPL4
Plastid ribosomal protein L4 (243 aa)
     
  0.916
MRPL3
Mitochondrial ribosomal protein L3 (285 aa)
     
  0.915
EDP00293
Predicted protein (347 aa)
     
  0.915
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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