STRINGSTRING
EDP08216 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP08216" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP08216Predicted protein (290 aa)    
Predicted Functional Partners:
EDP02420
Predicted protein (323 aa)
     
        0.648
EDP02419
Predicted protein (143 aa)
     
        0.516
EDP01153
Predicted protein (318 aa)
     
        0.508
EDP08493
Predicted protein (540 aa)
     
        0.507
ERM5
ERD4-related membrane protein (1535 aa)
     
        0.506
EDP07820
Predicted protein (239 aa)
     
        0.478
EDP04832
Predicted protein (613 aa)
     
        0.476
EDP09821
Predicted protein (102 aa)
     
        0.471
EDP04948
Predicted protein (559 aa)
     
        0.436
EDO98368
Predicted protein (2252 aa)
     
        0.428
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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