STRINGSTRING
SPP1B protein (Chlamydomonas reinhardtii) - STRING interaction network
"SPP1B" - Signal peptide peptidase in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPP1BSignal peptide peptidase (744 aa)    
Predicted Functional Partners:
EDP06262
Predicted protein (1097 aa)
   
        0.596
EDP06926
Predicted protein (796 aa)
              0.518
EDO96688
Predicted protein (520 aa)
       
      0.513
POLQ1
DNA polymerase theta (2508 aa)
   
   
  0.491
NTRC1
NADPH-dependent thioredoxin reductase (517 aa)
   
   
  0.418
CAX4
CAX family of cation antiporters, membrane protein (787 aa)
   
        0.411
OASTL3
Cysteine synthase (387 aa)
     
      0.403
OASTL4
Cysteine synthase (359 aa)
     
      0.403
OASTL1
Cysteine synthase (414 aa)
     
      0.403
OASTL2
Cysteine synthase (382 aa)
     
      0.403
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
Server load: low (8%) [HD]