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EDP08234 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP08234" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP08234Predicted protein (263 aa)    
Predicted Functional Partners:
EDP06863
Predicted protein (259 aa)
   
 
0.956
EDO99399
Predicted protein (281 aa)
   
 
0.950
RPB7A
DNA-directed RNA polymerase II, 19 kDa polypeptide (176 aa)
     
      0.907
EDO96725
Predicted protein (111 aa)
 
            0.722
RPB7B
DNA-directed RNA polymerase II, 19 kDa polypeptide (201 aa)
     
      0.705
RPB6
Subunit of DNA-directed RNA polymerase (87 aa)
     
      0.682
EDP02327
Histone methyltransferase (1105 aa)
     
      0.654
RPB3
DNA-directed RNA polymerase II, 36 kDa polypeptide (275 aa)
     
      0.600
EDP07113
Predicted protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (720 aa)
   
 
  0.577
EDP09795
Global transcription factor (1188 aa)
     
      0.458
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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