STRINGSTRING
EDP08240 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP08240" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP08240Predicted protein (472 aa)    
Predicted Functional Partners:
NPH4
Nephrocystin-4-like protein (1772 aa)
     
        0.654
EDP09100
Predicted protein (654 aa)
     
        0.648
EDO96763
Predicted protein (688 aa)
     
        0.555
SPO11A
Topoisomerase; Component of the DNA topoisomerase VI involved in chromatin organization and progression of endoreduplication cycles. Relaxes both positive and negative superturns and exhibits a strong decatenase activity (414 aa)
     
        0.515
EDO99797
Predicted protein (145 aa)
     
        0.512
LIG1
DNA ligase (813 aa)
     
        0.512
EDP08650
Predicted protein; Endonuclease that specifically degrades the RNA of RNA- DNA hybrids (197 aa)
     
        0.509
EDP01673
Predicted protein (238 aa)
     
        0.509
EDP08039
Predicted protein (177 aa)
     
        0.505
EDP05795
Predicted protein (489 aa)
     
        0.504
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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