STRINGSTRING
EDP08248 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP08248" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP08248Predicted protein (983 aa)    
Predicted Functional Partners:
EDO98480
Predicted protein (653 aa)
     
        0.694
EDP04516
SWI/SNF chromatin remodeling complex component (845 aa)
     
        0.666
EDP09586
Predicted protein (1409 aa)
     
        0.665
EDO99137
Predicted protein (682 aa)
     
        0.662
EDO98689
Predicted protein (747 aa)
     
        0.658
EDP09550
Predicted protein (172 aa)
     
        0.654
EDP00748
Predicted protein (390 aa)
     
        0.653
EDP00491
Hypothetical protein (516 aa)
     
        0.650
EDP06099
ATP-dependent DNA helicase (330 aa)
     
        0.647
EDP05535
Predicted protein (639 aa)
     
        0.644
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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