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HFO1 protein (Chlamydomonas reinhardtii) - STRING interaction network
"HFO1" - Histone H4 in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HFO1Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling (103 aa)    
Predicted Functional Partners:
EDP08975
Histone H3 (135 aa)
     
  0.963
HTR7
Histone H3 (133 aa)
     
  0.963
EDP08437
Histone H3 (111 aa)
     
  0.963
HTR1
Histone H3 (135 aa)
     
  0.963
HTR41
Histone H3 (135 aa)
     
  0.963
EDP09315
High mobility group protein (552 aa)
     
  0.929
SET4
Histone methyltransferase (2983 aa)
     
  0.923
EDP08954
Histone H2A variant (144 aa)
     
  0.921
EDP03175
Histone methyltransferase (1708 aa)
     
  0.920
HTA4
Histone H2A (130 aa)
     
  0.910
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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