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EDP08276 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP08276" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP08276Predicted protein (229 aa)    
Predicted Functional Partners:
FPPS
Farnesyl diphosphate synthase (360 aa)
     
  0.960
GGPS
Geranylgeranyl diphosphate synthase (345 aa)
   
  0.958
EDO99033
Predicted protein (503 aa)
     
 
  0.941
EDP09664
Predicted protein (321 aa)
     
 
  0.908
EDP06129
Farnesyl-diphosphate farnesyltransferase (378 aa)
     
  0.860
PSY
Phytoene synthase (382 aa)
     
  0.860
EIF5Ba
Eukaryotic initiation factor (1651 aa)
   
   
  0.746
EDP06926
Predicted protein (796 aa)
   
   
  0.708
EDP00988
AIR synthase-related protein (1403 aa)
         
  0.653
PCT2
Phosphatidate cytidylyltransferase (288 aa)
   
   
  0.653
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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