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EDP08296 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP08296" - High mobility group protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP08296High mobility group protein (179 aa)    
Predicted Functional Partners:
EDO96685
Global transcription factor (1054 aa)
     
  0.817
EDP05135
SNF2 superfamily protein (1610 aa)
       
  0.690
PYR5
Uridine 5’-monophosphate synthase (474 aa)
       
      0.681
RFC1
DNA replication factor C complex subunit 1 (1182 aa)
     
      0.675
EDP09315
High mobility group protein (552 aa)
     
0.624
EDO99484
SNF2 superfamily protein (797 aa)
     
  0.572
EDP03406
Predicted protein (594 aa)
     
  0.566
RPA70B
Replication protein A, 70 kDa DNA-binding subunit (647 aa)
     
 
  0.561
HTV3
Histone H3 variant (156 aa)
     
  0.555
EDP10032
Predicted protein (120 aa)
       
  0.551
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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