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EDP08317 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP08317" - AAA-ATPase domain family protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP08317AAA-ATPase domain family protein (427 aa)    
Predicted Functional Partners:
EDO99092
Predicted protein (236 aa)
     
  0.829
CPLD53
Predicted protein (102 aa)
     
  0.813
EDP00598
Predicted protein; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins (257 aa)
       
  0.772
EDO97961
Predicted protein; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins (129 aa)
       
  0.772
EDO97323
Predicted protein (434 aa)
     
 
  0.703
EDP04369
Predicted protein (523 aa)
     
 
  0.687
SYP3
Qa-SNARE protein, Sed5/Syntaxin5-family (339 aa)
     
  0.672
RPT4
26S proteasome regulatory subunit (399 aa)
 
0.667
EDP02513
Predicted protein (452 aa)
     
 
  0.653
RFC1
DNA replication factor C complex subunit 1 (1182 aa)
     
  0.645
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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