STRINGSTRING
EDP08334 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP08334" - Serine/threonine protein phosphatase in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP08334Serine/threonine protein phosphatase (398 aa)    
Predicted Functional Partners:
EDO98475
Predicted protein (1008 aa)
   
  0.796
EDP02966
Predicted protein (219 aa)
   
  0.782
EDP05287
Protein kinase (497 aa)
   
  0.762
EDP03075
Predicted protein (168 aa)
   
  0.762
EDP01185
Predicted protein (464 aa)
   
  0.760
EDP04565
Predicted protein (447 aa)
   
  0.752
EDP06924
Predicted protein (819 aa)
   
  0.747
EDP02200
Predicted protein (911 aa)
   
  0.747
EDO98855
Predicted protein (593 aa)
   
  0.744
EDP07772
Predicted protein (153 aa)
   
  0.738
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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