STRINGSTRING
ATPvL1 protein (Chlamydomonas reinhardtii) - STRING interaction network
"ATPvL1" - Vacuolar H(+)-ATPase V0 sector, c/c' subunits in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATPvL1Vacuolar H(+)-ATPase V0 sector, c/c’ subunits; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells (176 aa)    
Predicted Functional Partners:
ATP1A
Mitochondrial F1F0 ATP synthase, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane (569 aa)
   
  0.993
ATP1B
Mitochondrial F1F0 ATP synthase, alpha subunit (736 aa)
   
  0.993
atpA
CF1 ATP synthase alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit (508 aa)
   
  0.993
atpF
CF0 ATP synthase subunit I; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation (175 aa)
   
  0.993
ATPvL2
Vacuolar proton-ATPase subunit c’’ proteolipid (205 aa)
     
0.989
ATP2
Beta subunit of mitochondrial ATP synthase; Produces ATP from ADP in the presence of a proton gradient across the membrane (574 aa)
   
  0.986
atpB
CF1 ATP synthase beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits (491 aa)
   
  0.986
ATP6
F1F0 ATP synthase subunit 6 (340 aa)
   
  0.984
atpI
CF0 ATP synthase subunit IV; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane (238 aa)
   
  0.984
ATPC
Chloroplast ATP synthase gamma chain (358 aa)
   
  0.983
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
Server load: low (6%) [HD]