STRINGSTRING
EDP08342 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP08342" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP08342Predicted protein (1592 aa)    
Predicted Functional Partners:
EDP08597
Predicted protein (383 aa)
     
     
0.720
EDP05099
Predicted protein (383 aa)
     
        0.526
DRP4A
Dynamin-related GTPase (908 aa)
     
        0.516
EDP04466
Predicted protein (229 aa)
     
        0.503
EDP06760
Transcription factor (238 aa)
     
        0.478
EDP09814
Predicted protein (177 aa)
     
        0.476
EDP09096
Predicted protein (470 aa)
     
        0.476
EDO96827
Predicted protein (221 aa)
     
        0.476
EDP01465
Predicted protein (572 aa)
     
        0.475
GTR15
Glycosyl transferase (563 aa)
     
        0.475
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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