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EDP08344 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP08344" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP08344Predicted protein (167 aa)    
Predicted Functional Partners:
EDP05450
Global transcription factor (325 aa)
     
  0.990
RPB6
Subunit of DNA-directed RNA polymerase (87 aa)
       
  0.963
EDP07045
Predicted protein (285 aa)
     
  0.962
EDP01939
Predicted protein (435 aa)
     
  0.948
RPB7B
DNA-directed RNA polymerase II, 19 kDa polypeptide (201 aa)
       
  0.932
RPB5
DNA-directed RNA polymerase II, 23 kDa polypeptide (206 aa)
     
  0.931
EDP06523
Predicted protein; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation (119 aa)
       
  0.926
EDP07490
Predicted protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (109 aa)
     
  0.909
EDP05525
Predicted protein (224 aa)
       
  0.908
RPB1
DNA-directed RNA polymerase II, largest subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1789 aa)
     
  0.905
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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