STRINGSTRING
EDP08348 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP08348" - WD40 repeat protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP08348WD40 repeat protein (472 aa)    
Predicted Functional Partners:
EDP08133
Predicted protein (583 aa)
     
  0.999
UTP1
Nucleolar protein, component of the U3 processome (996 aa)
     
  0.997
EDP03163
Predicted protein (514 aa)
     
  0.997
EDP05784
Predicted protein (610 aa)
     
  0.997
EDP04019
Predicted protein (137 aa)
     
  0.997
EDP05821
Predicted protein (924 aa)
     
  0.996
EDO98320
Predicted protein (641 aa)
     
    0.991
EDP02918
Nucleolar protein (1380 aa)
     
  0.991
EDP05239
Predicted protein (543 aa)
     
 
  0.988
EDO97607
Predicted protein (193 aa)
     
  0.987
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
Server load: low (10%) [HD]