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STRINGSTRING
EDP08359 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP08359" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP08359Predicted protein (307 aa)    
Predicted Functional Partners:
EDP03322
Predicted protein (811 aa)
     
 
  0.975
EDO96746
Nuclear pre-mRNA splicing factor, component of splicing factor 3b (444 aa)
     
 
  0.953
EDP01082
Predicted protein (186 aa)
     
 
  0.952
CWC22
Cwc22 pre-mRNA splicing factor (592 aa)
     
 
  0.944
CYN57
Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (619 aa)
     
 
  0.930
SPL2
SPL2p; Splicing factor 3a, subunit 2 (287 aa)
     
 
  0.919
EDO97595
Nuclear pre-mRNA splicing factor, component of splicing factor 3b (1078 aa)
     
 
  0.913
EDP06814
Predicted protein (84 aa)
     
 
  0.913
EDP01571
RNA binding protein (133 aa)
     
 
  0.907
EDP09254
Predicted protein (164 aa)
     
   
  0.902
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, SAG 53.72 [[Chlamydomonas smithii]], SAG 54.72 [[Chlamydomonas smithii]], UTEX 90
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