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EDP08360 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP08360" - Hypothetical protein in Chlamydomonas reinhardtii
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP08360Hypothetical protein (498 aa)    
Predicted Functional Partners:
EDO98622
Predicted protein (107 aa)
     
        0.525
EDO98845
Predicted protein (471 aa)
     
        0.514
EDP05447
Predicted protein (685 aa)
     
        0.513
RET1
Predicted protein (1029 aa)
     
        0.509
EDP08898
Predicted protein (988 aa)
     
        0.505
EDP08903
Predicted protein (1134 aa)
     
        0.504
CTP3
Heavy metal transporting ATPase (1041 aa)
     
        0.487
EDO98311
Predicted protein (1716 aa)
     
        0.480
EDP07161
Predicted protein (239 aa)
     
        0.479
EDP05600
DNA topoisomerase-like protein; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5’-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3’-OH DNA strand (772 aa)
     
        0.479
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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