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UBCH1p protein (Chlamydomonas reinhardtii) - STRING interaction network
"UBCH1p" - Ubiquitin carboxyl-terminal hydrolase in Chlamydomonas reinhardtii
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBCH1pUbiquitin carboxyl-terminal hydrolase (331 aa)    
Predicted Functional Partners:
EDO98571
Predicted protein (226 aa)
     
  0.991
RPN12
26S proteasome regulatory subunit (267 aa)
     
  0.990
RPN10
26S proteasome regulatory subunit (245 aa)
     
  0.989
RPN3
26S proteasome regulatory subunit (488 aa)
     
  0.988
RPN7
26S proteasome regulatory subunit (363 aa)
     
  0.988
RPN6
26S proteasome regulatory subunit (421 aa)
     
  0.987
EDP03665
Predicted protein (400 aa)
     
  0.986
POA3
20S proteasome alpha subunit C; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH (253 aa)
     
    0.986
RPN2
26S proteasome regulatory subunit (1037 aa)
     
  0.986
POA7
20S proteasome alpha subunit G (249 aa)
     
  0.986
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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