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HDH1p protein (Chlamydomonas reinhardtii) - STRING interaction network
"HDH1p" - Haloacid dehalogenase-like hydrolase in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HDH1pHaloacid dehalogenase-like hydrolase (323 aa)    
Predicted Functional Partners:
TPS3
Trehalose-6-phosphate synthase/phosphatase (762 aa)
         
  0.669
TPS1
Trehalose-6-phosphate synthase/phosphatase (875 aa)
         
  0.669
PGI1
Phosphoglucose isomerase (646 aa)
   
 
  0.617
EDP05064
Riboflavin kinase (421 aa)
   
  0.603
MPI1
Mannose-6-phosphate isomerase (365 aa)
     
 
  0.484
EDP02981
Predicted protein (121 aa)
   
 
    0.459
EDP09204
Predicted protein (1023 aa)
       
      0.437
EDP09203
Predicted protein (142 aa)
       
      0.437
EDP09450
Predicted protein (925 aa)
       
 
  0.436
EDP09444
Predicted protein (961 aa)
       
 
  0.436
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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