STRINGSTRING
SPP1C protein (Chlamydomonas reinhardtii) - STRING interaction network
"SPP1C" - Signal peptide peptidase in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPP1CSignal peptide peptidase (457 aa)    
Predicted Functional Partners:
EDP08602
Predicted protein (338 aa)
     
        0.675
EDP01694
Predicted protein (672 aa)
     
        0.654
EDO96041
Predicted protein (758 aa)
     
        0.651
EDP07119
Predicted protein (287 aa)
     
        0.568
EDO98870
Predicted protein (299 aa)
     
        0.517
EDP03854
Predicted protein (121 aa)
     
        0.480
EDP08095
Predicted protein (719 aa)
     
        0.475
EDP03334
Predicted protein (433 aa)
     
        0.475
EDO96507
Predicted protein (396 aa)
     
        0.424
SFA
SF-assemblin (276 aa)
     
        0.421
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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