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CRB1 protein (Chlamydomonas reinhardtii) - STRING interaction network
"CRB1" - C1, subunit of the circadian RNA-binding protein CHLAMY 1 in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRB1C1, subunit of the circadian RNA-binding protein CHLAMY 1 (511 aa)    
Predicted Functional Partners:
EDP02454
Glycine-rich RNA-binding protein (165 aa)
     
 
  0.898
SMP12
U1 small nuclear ribonucleoprotein (394 aa)
     
      0.897
EDP00496
Predicted protein (178 aa)
     
      0.787
CRB3
RNA-binding protein C3, CELF family (382 aa)
           
  0.780
SRP36
SR protein factor (320 aa)
     
      0.721
SRP35
SR protein factor (338 aa)
     
      0.690
EDP01159
Predicted protein (170 aa)
     
      0.672
PRP19
Spliceosome component, nuclear pre-mRNA splicing factor (503 aa)
     
        0.667
CBP20
Nuclear cap-binding protein (143 aa)
     
      0.664
EDO96956
Predicted protein (632 aa)
     
 
  0.660
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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