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EDP08400 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP08400" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP08400Predicted protein (350 aa)    
Predicted Functional Partners:
EDP08847
Predicted protein (1305 aa)
     
  0.994
EDP03422
Predicted protein (1197 aa)
     
  0.800
EDP08387
Predicted protein (517 aa)
     
  0.799
EDP06556
Predicted protein (189 aa)
     
  0.792
IFT80
Intraflagellar transport particle protein 80 (747 aa)
     
  0.792
CDH1
Activator and specificity factor for anaphase promoting complex (446 aa)
     
  0.792
EDO98316
Predicted protein (1220 aa)
     
  0.792
RPL40
Ribosomal protein L40 (128 aa)
       
    0.755
UBQ7
Ubiquitin-fusion protein (338 aa)
       
  0.737
UBQ6
Ubiquitin fusion protein (805 aa)
       
  0.737
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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