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CGL55 protein (Chlamydomonas reinhardtii) - STRING interaction network
"CGL55" - Cleavage and polyadenylation factor 6-related protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CGL55Cleavage and polyadenylation factor 6-related protein (2174 aa)    
Predicted Functional Partners:
EDP05072
Predicted protein (312 aa)
     
 
  0.865
RPB1
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1789 aa)
     
 
  0.836
RPB7A
DNA-directed RNA polymerase II, 19 kDa polypeptide (176 aa)
     
 
  0.829
PIN4
Peptidyl-prolyl cis-trans isomerase, parvulin-type (255 aa)
     
 
  0.785
EDP02031
Predicted protein (199 aa)
     
 
  0.695
EDP09795
Global transcription factor (1188 aa)
     
 
  0.682
EDP06235
SWI2/SNF2-like protein (1286 aa)
     
 
  0.644
EDP04298
Predicted protein (323 aa)
     
   
  0.621
EDP01692
Double stranded RNA-binding protein (1520 aa)
     
   
  0.615
CDKC1
Cyclin dependent kinase ; Belongs to the protein kinase superfamily (487 aa)
     
 
  0.592
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, SAG 53.72 [[Chlamydomonas smithii]], SAG 54.72 [[Chlamydomonas smithii]], UTEX 90
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