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EDP08415 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP08415" - Protein kinase in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP08415Protein kinase (402 aa)    
Predicted Functional Partners:
PRP8
Splicing factor, component of the U5 snRNP and of the spliceosome (2346 aa)
     
 
  0.946
EFG2
Elongation factor 2 (845 aa)
     
      0.934
EFG5
Elongation factor EF-Tu-like protein (989 aa)
     
 
  0.701
EDP08930
Predicted protein (92 aa)
       
      0.680
EFG1
Chloroplast elongation factor G (714 aa)
       
      0.680
EDO97503
Predicted protein (260 aa)
       
      0.680
EDO97501
Predicted protein (114 aa)
       
      0.680
PRP6
Splicing factor, component of the U4/U6-U5 snRNP complex (947 aa)
     
 
  0.668
EDP04728
Predicted protein (165 aa)
       
      0.626
EDP07967
Predicted protein (343 aa)
     
      0.506
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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